CLI

CLI guide

Search, sample, validate selections, and operate durable runs from the navigator command.

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navigator auth login
navigator catalog
navigator search --smiles 'CCO'
navigator search-cheese --smiles 'CCO' --scorer shape
navigator search-substructure --query 'C(=O)N1CCC1' --query-format smarts
navigator sample --count 100 --seed 12345

Every multi-query file creates one durable run:

navigator search --input leads.smi --limit 10 --json
navigator run status run_01K...
navigator run watch run_01K...
navigator run results run_01K...
navigator run cancel run_01K...

Selection and run JSON/YAML are portable:

navigator selection validate selection.yaml
navigator selection estimate selection.yaml
navigator selection execute selection.yaml
navigator selection export selection.yaml --format json
navigator run estimate run.yaml
navigator run create run.yaml --idempotency-key campaign-v1

run results emits JSON Lines and exits 2 when any item failed while preserving successful output. Credentials never appear as command arguments except secure stdin for headless login.